Insertion junction: CLIP2.034586_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034586
Chromosome:chromosome 8
Location:3417488
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378200 PPO1 (1 of 1) 5.1.99.6 - NAD(P)H-hydrate epimerase / NAD(P)HX epimerase; Pyridoxamine 5'-phosphate oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCATGCATGCACCACCGGTACCACTCCCCAGTGCCTGTGGGGAGCCGT
Internal bar code:GTGATTGAGGTCAGGTTTTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:594
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTCGCCATCTACTACGA
Suggested primer 2:CTTGTTCCTGTGTGTGTGCG