Insertion junction: CLIP2.034605_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034605
Chromosome:chromosome 10
Location:1944861
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g431900 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTAGTCATTTGGTCGAGGGCGTGGGCGTGGGCGTGGGCGTGGGCGTGG
Internal bar code:AAAATGCCGAATTCCTTTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3958
LEAP-Seq percent confirming:65.0943
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTCACATGCATCCGTGT
Suggested primer 2:GCCAACAGACACTACACCGA