Insertion junction: CLIP2.034607_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034607
Chromosome:chromosome 3
Location:7384374
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206250 (1 of 39) IPR009003 - Peptidase S1, PA clan CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCGATAGCGTCCATTTGGGTCACGGGATCCTTCACAGTGTGCAGCAC
Internal bar code:AGACGCACACATGCGTGCATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3201
LEAP-Seq percent confirming:98.6842
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTTGGTGACACGAAACC
Suggested primer 2:GATCGCCACCTTGGTCTTGA