Insertion junction: CLIP2.034609_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034609
Chromosome:chromosome 17
Location:4209300
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g729400 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCTGTCTTTCCACACGCCTGCCTCACACGCCCCACAGCTACGCCGCAT
Internal bar code:AGGATGGAGGTAAGGACTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1621
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTAGCTGTTGTTGGGCG
Suggested primer 2:CACGTCCACATCCTTCTGCT