Insertion junction: CLIP2.034616_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034616
Chromosome:chromosome 6
Location:709359
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g254700 (1 of 1) K18716 - nucleoporin NUP42 (NUP42, RIP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCAGGGCGCAGGCGGAGGGGGCCGCTTCAACAACCAGCAGCAGCAAC
Internal bar code:ATTCGTAGCATCATCGGTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3856
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCGTGCAAGAACTATCG
Suggested primer 2:ACGTGCTGTTGCTTGTGTTC