Insertion junction: CLIP2.034617_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034617
Chromosome:chromosome 10
Location:4344966
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g449850 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCCAGGCGGCGCGGTGCGCAGCAGGGCAGGTCGCATCGCCGCGGCGG
Internal bar code:AGGGGCTAGAATTAATGCGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1900
LEAP-Seq percent confirming:89.2857
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGGGTACAGTGAGAGGTA
Suggested primer 2:GACAGTGACAGTGACGGAGG