Insertion junction: CLIP2.034620_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034620
Chromosome:chromosome 3
Location:8615359
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210513 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCGGAGCGCCGCTGCAGTCAGGTGAGAGCCTACATGCGGGTGGGGCC
Internal bar code:CCGTTCCAGAGAAAGGGATGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1892
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAGTGATGACCATTCCC
Suggested primer 2:CGCGGCCATAAGAAACTTCG