Insertion junction: CLIP2.034650_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034650
Chromosome:chromosome 3
Location:3237529
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165350 (1 of 3) 1.1.1.30 - 3-hydroxybutyrate dehydrogenase / D-beta-hydroxybutyrate dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTCCGTTTGCGTCGGCGCGCCGCATACCGTACGGCATCACCCACCAT
Internal bar code:TCTGGGGGTTATTTAAGGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3669
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTACCCGCACTCACACTG
Suggested primer 2:ACAGTGTGCAGGAGCTAACC