Insertion junction: CLIP2.034652_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034652
Chromosome:chromosome 6
Location:5587872
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800699 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCGATGCTGTCTCCGGGGTGTGTCTCCATGACTGACGTGAGTGCTAC
Internal bar code:GTAAAGAAAGACGCCTGCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1795
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTTGCAGGCTAACTTGA
Suggested primer 2:AAGACTCCATCTGCTGGCAC