Insertion junction: CLIP2.034653_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034653
Chromosome:chromosome 3
Location:3222291
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165250 (1 of 1) PF01248//PF12874 - Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) // Zinc-finger of C2H2 type (zf-met) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCCCAGAATAGATGAAATGGGCCGCAGAATGCAAAATCTTAAGGGAAC
Internal bar code:TGCCGACAGGTTAGCAAATAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2530
LEAP-Seq percent confirming:87.2727
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATTCGGATGAGGAGGAG
Suggested primer 2:GTCAGACCTCCGTCATCGTC