Insertion junction: CLIP2.034664_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034664
Chromosome:chromosome 13
Location:4496143
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g602950 (1 of 1) IPR027050 - Nuclease SbcCD subunit C intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAATCGCGGGACATGTAAAGCAAGGCAGTACATAAGCTATGGGACCCCA
Internal bar code:GGCTGGATTGCTGTTAGTCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:408
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAATCAAACGACGGGGAGGT
Suggested primer 2:GAGAAGGGTTGGGGTGGATG