Insertion junction: CLIP2.034665_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034665
Chromosome:chromosome 6
Location:5529090
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286700 (1 of 25) IPR000210//IPR011333 - BTB/POZ domain // POZ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGTCAGGCTAGGGGATAATATGAGCCGAGGACAAGGAAGACAAGGAA
Internal bar code:TATAGAGTTGTATTGCAGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1143
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATGGAACCCAACAAACC
Suggested primer 2:CCAACTCGCTTGTCCTGACT