Insertion junction: CLIP2.034676_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034676
Chromosome:chromosome 14
Location:690750
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g612350 (1 of 25) IPR001965//IPR011011//IPR013083//IPR019787 - Zinc finger, PHD-type // Zinc finger, FYVE/PHD-type // Zinc finger, RING/FYVE/PHD-type // Zinc finger, PHD-finger CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCTGGGCGGGCTGGCCGAAGCACTGCAGCGCACAGGCGGGCCCGGCG
Internal bar code:AATGCCGGGGTATTTAAATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:720
LEAP-Seq percent confirming:7.69231
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCTTGGCAGCTCATCAA
Suggested primer 2:CAGCACGGGTGGTAGTGAC