Insertion junction: CLIP2.034683_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034683
Chromosome:chromosome 11
Location:222340
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467554 (1 of 15) PF01694 - Rhomboid family (Rhomboid) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGTGGTGTGGGGTTGCCTGGGGTTGGATGTGTTGGGGTGCAAGTGCG
Internal bar code:GTGTAGGTTTAGTTGGATGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1476
LEAP-Seq percent confirming:70.3704
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGATAACGACGACCGGAG
Suggested primer 2:ACACATGGACGCAAAGCCTA