Insertion junction: CLIP2.034692_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034692
Chromosome:chromosome 1
Location:2609067
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015550 DDA1 (1 of 1) 4.1.2.52 - 4-hydroxy-2-oxoheptanedioate aldolase / HKHD aldolase; 2-dehydro-3-deoxyglucarate aldolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGTGCGGCGCCGCCCGCGCCCTCCTGCACGGCATGACGGCAGGCGCA
Internal bar code:GGGATTGGATGATGAGCATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1721
LEAP-Seq percent confirming:72.093
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:AATAGGGACGCGCAAAGTCA
Suggested primer 2:CATTCCGAGGTCCGTGTCAA