Insertion junction: CLIP2.034696_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034696
Chromosome:chromosome 12
Location:4381578
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g519550 OPR53 OctotricoPeptide Repeat protein 53 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCTGCCTCACCGGAGCCGGAGACCGCGGCCAGCACCAGCGCGACTGC
Internal bar code:GGTCGGACGCGAGGCGTACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:903
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGGACTAAGCTGACCATC
Suggested primer 2:TCAGCAGCGTTGACCTGAAT