Insertion junction: CLIP2.034710_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034710
Chromosome:chromosome 13
Location:3492211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g587550 FXL3 FixL-like PAS domain protein; (1 of 12) 2.7.13.3 - Histidine kinase / Protein kinase (histidine) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGGCGTGTCAGGAGCGTGAGCGATTGGGCGGGACACCATTTGAGGCG
Internal bar code:TCTCAGCTGCACCTCTGATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1810
LEAP-Seq percent confirming:95.9459
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATGCGTGGTATGCAATG
Suggested primer 2:ATCTGCTGGTGGAACTTCCG