Insertion junction: CLIP2.034714_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034714
Chromosome:chromosome 5
Location:254441
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243150 Carbonic anhydrase-related protein; (1 of 1) PF04357 - Family of unknown function (DUF490) (DUF490) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATGTAACCCTCCCTTCCCCTCACCCCCCTGCCTACGCCTTCACTTCTT
Internal bar code:GGTATTGGGTTGTGCTTTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:70
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCACTGCAGCCTGTTTG
Suggested primer 2:CATATTCACATGCGCGCACA