Insertion junction: CLIP2.034719_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034719
Chromosome:chromosome 3
Location:2905369
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162701 SRH5 SNF2-related DNA/RNA helicase; (1 of 1) 3.6.4.11 - Nucleoplasmin ATPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGGAATTCTTGGAATACGTTGTGGTGTGGCTGAACATGCCGATTGGA
Internal bar code:CGCCTACCAGGGGGGTTTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1027
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCAGGTGGTCGGAATGTG
Suggested primer 2:ACTTGTAAGTGGGCAGTCGG