Insertion junction: CLIP2.034723_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034723
Chromosome:chromosome 6
Location:1405144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g259700 (1 of 6) 3.1.2.2 - Palmitoyl-CoA hydrolase / Long-chain fatty-acyl-CoA hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCTTCACCCGTGCAGACGGCTTCGCCCGATCGCACGCTGTTTGTACT
Internal bar code:GTTAGAGATTCGTGGATTGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1934
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTACTTCACTCGATCCGCCC
Suggested primer 2:TTACGTCTTGTTCTGCCGCT