Insertion junction: CLIP2.034725_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034725
Chromosome:chromosome 5
Location:496524
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244150 (1 of 1) IPR002073//IPR020683 - 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGCGGCAAGACAATGGTATTTTGTGTTGCACATGGATGCACGCTACT
Internal bar code:TTTAGGTAATACATATTGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1227
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCCTCTGCCTTCTCCT
Suggested primer 2:GGCAACATGGAAGCCCTACT