Insertion junction: CLIP2.034729_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034729
Chromosome:chromosome 3
Location:1040213
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800291 (1 of 9) 3.2.1.78 - Mannan endo-1,4-beta-mannosidase / Endo-1,4-mannanase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCGTGGCTAAACTCAACACAGAGCACGCTGCGGCGGACGGTCGTGAG
Internal bar code:TCGCTACACGTTACCCCCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1060
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCAGCAAGTCAAACACG
Suggested primer 2:TTACACGGTCCTTGTCCACG