Insertion junction: CLIP2.034742_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034742
Chromosome:chromosome 9
Location:2592869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801017 (1 of 3) K14007 - protein transport protein SEC24 (SEC24) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTAATCTTTACGGTATTGCCATGTGTTGAATCACGTGTTGACCTTTGC
Internal bar code:CGGTCGGTTCATTGTTTGCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:360
LEAP-Seq percent confirming:38.8889
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCCGTTGTCCATCTTCC
Suggested primer 2:CCACGTATCGGGTGAGTCAG