Insertion junction: CLIP2.034743_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034743
Chromosome:chromosome 17
Location:3927620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802075 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGGTGCGCATGACAAGGAACGCACAGAGACCGTGTCCATGCGTGTGCT
Internal bar code:TGCCTTCTCGACCGTACTTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3747
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCATCGTCATCGTCGTC
Suggested primer 2:TCAAGTTCCACGAGAGGTGC