Insertion junction: CLIP2.034744_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034744
Chromosome:chromosome 12
Location:7098795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g560000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCCTCAGCCGGCGGCGGCAGCAGCCCGCCCGCCGCCACCGCCACTGC
Internal bar code:TAGTCTGGGTCTTTGTCGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1145
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGTGTGTCCAGTAGTGG
Suggested primer 2:CGGAATCACTGGAGGGCTTT