Insertion junction: CLIP2.034747_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034747
Chromosome:chromosome 3
Location:3103672
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800314 (1 of 77) IPR001623 - DnaJ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAAAAGGCGGGTCGTGTGGTGGGAAGCTGGTTGTTCATGTGTGTTCAG
Internal bar code:GGGGGCTTCAGGTTCATGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2238
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTGACATGGGTCCGAACG
Suggested primer 2:AACTCACCCCAACACACGTT