Insertion junction: CLIP2.034758_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034758
Chromosome:chromosome 8
Location:3686326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g380151 (1 of 1) PF00628//PF15613//PF15614 - PHD-finger (PHD) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGGGCTCGTTGGTCACGGCACCACCACCACCACCACCACCACCCACC
Internal bar code:GTTCATTCTAGGACATAGGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:539
LEAP-Seq percent confirming:64.5161
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCCACAACCCCCAAAAT
Suggested primer 2:ACCGTAACAAAGGACCGTCC