Insertion junction: CLIP2.034764_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034764
Chromosome:chromosome 9
Location:5881258
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411900 SHMT3 (1 of 3) 2.1.2.1 - Glycine hydroxymethyltransferase / Threonine aldolase; Serine hydroxymethyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTTGGTGGTTTTGTGTGGGGACTGAGATCCCCAAATGGGCGCTGTTG
Internal bar code:GGAGCTCCACAGTCAGGCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:234
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCTACTCCACTTCCAAC
Suggested primer 2:TGGGGACTCGGATAAGCAGA