Insertion junction: CLIP2.034772_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034772
Chromosome:chromosome 3
Location:3669702
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre50.g761447 (1 of 1) K03500 - 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] (rsmB, sun) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAGGACCCGGCCTGGGCGCGCGCGGGGCCGGCCCGAGGCGGCGGCGC
Internal bar code:CACTAAGAGGCATCGGGACCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:471
LEAP-Seq percent confirming:41.1765
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTATAGGTGCATGGGGA
Suggested primer 2:TGTGGAACGCTGCTTACTGT