Insertion junction: CLIP2.034778_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034778
Chromosome:chromosome 3
Location:8605030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210625 (1 of 1) PTHR10799//PTHR10799:SF721 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGTCTTCCAAACAGGGTTGTGATGTGTATGCCGGGCCACCATTGGCC
Internal bar code:TCCAGCTTCAATGGTACCGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1675
LEAP-Seq percent confirming:97.9592
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CAGACTATCTCGTTGGGCCC
Suggested primer 2:CCCCAGCACCATGATCAGTT