Insertion junction: CLIP2.034780_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034780
Chromosome:chromosome 3
Location:7828249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202900 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCCCGCCGCCCGCAATCAAACGGTTCGCTGCTGCCCGCCCGTCGGCC
Internal bar code:CTCATTGTGTTTAAAGGCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2165
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCAGACCCTCTCCCTCA
Suggested primer 2:ATTTGCGCCGTAACGATGTG