Insertion junction: CLIP2.034780_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034780
Chromosome:chromosome 17
Location:480186
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699050 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCACTTGTGCAGTGCGTGTTAGCCATCTTACACGTAGGTTGGACCCTC
Internal bar code:TAAAGAGAACTGCTGTTACCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1409
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTCACAGCCCCAAACAA
Suggested primer 2:GAAGAAGGTATCGGAGGCGG