Insertion junction: CLIP2.034783_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034783
Chromosome:chromosome 6
Location:4246566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278251 ACRY1,aCRY (1 of 1) K02295 - cryptochrome (CRY); Animal-like Cryptochrome intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCGATGTGGAGTGGATACTGGACAAAGCGCTGCAAGCGAAATGCGCC
Internal bar code:CGAGGCAGGTAGTGTAGCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1704
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAAACCAGGCTAACCGGT
Suggested primer 2:GCAGCACACCTCTCACTTCT