Insertion junction: CLIP2.034791_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034791
Chromosome:chromosome 5
Location:1054614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247650 (1 of 32) IPR000536 - Nuclear hormone receptor, ligand-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGACAGGCAACGCGGGCCACCAACACACCACGTACACACACGGCGCG
Internal bar code:AGCGGTAACTAACTATGGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1049
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACCACCACATTCTCAGA
Suggested primer 2:GGATTGGCTGTACTGCTGGT