Insertion junction: CLIP2.034791_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.034791
Chromosome:chromosome 5
Location:1054615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247650 (1 of 32) IPR000536 - Nuclear hormone receptor, ligand-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGATTTGTCTGGGGCAGCGATGCGGCTCGCGCCACTCGTTCACGTTC
Internal bar code:AGCGGTAACTAACTATGGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:183
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGATTGGCTGTACTGCTGGT
Suggested primer 2:GGCACCACCACATTCTCAGA