Insertion junction: CLIP2.034794_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034794
Chromosome:chromosome 10
Location:3427317
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444150 (1 of 2) IPR007743//IPR027417//IPR030385 - Immunity-related GTPases-like // P-loop containing nucleoside triphosphate hydrolase // IRG-type guanine nucleotide-binding (G) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGACTGGGTGCGCTCAGCTGCTGGGGAGGGGACACGACCCCCCTCAAAG
Internal bar code:CCTTGCGAGGCCACCTTATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3468
LEAP-Seq percent confirming:96.2264
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGCTGGCAGGTTTTTAA
Suggested primer 2:AGGATGAGGCAGTCAAAGGC