Insertion junction: CLIP2.034794_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034794
Chromosome:chromosome 10
Location:3427333
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444150 (1 of 2) IPR007743//IPR027417//IPR030385 - Immunity-related GTPases-like // P-loop containing nucleoside triphosphate hydrolase // IRG-type guanine nucleotide-binding (G) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGACGCGCAACGCAGGTGGCATCCCGCGCATGGGAAAGGCGGCCGTGG
Internal bar code:CCTTGCGAGGCCACCTTATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3550
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATGAGGCAGTCAAAGGC
Suggested primer 2:GCACGCTGGCAGGTTTTTAA