Insertion junction: CLIP2.034803_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034803
Chromosome:chromosome 3
Location:3461495
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167000 CrUBC3,CreSCE1b,CrUbcE2_2,SCE2,UBC3 (1 of 3) K10577 - ubiquitin-conjugating enzyme E2 I (UBE2I, UBC9); SUMO-conjugating enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGGGTAAAAGAGCAGGCCAAGAAGTATCCGCCCCCGGAGGATGAGGAA
Internal bar code:GAAAGGTCGCATCGAGTTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2873
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAATTAGCGTTGCCATCG
Suggested primer 2:CTAGTGCTCCAACATGGGCA