Insertion junction: CLIP2.034817_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034817
Chromosome:chromosome 6
Location:4090384
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278226 (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGGTCAGCCTCGGAGACCCTCGCAAGCCCGCGTCCTGTGAACCAGCG
Internal bar code:TTCATGAATATGTCATGCATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2384
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:ACTACACACCCTTCACAGCG
Suggested primer 2:AGGAGAGCGGGGTTCAGTAT