Insertion junction: CLIP2.034818_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034818
Chromosome:chromosome 17
Location:4828505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g734805 (1 of 8) PF00560 - Leucine Rich Repeat (LRR_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCAGGATCCAGATCTGGATCCAATTCGCTATAGTCTAGGCGGTCAGG
Internal bar code:CTTTGATAGAAAGTAACGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2563
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGACCAGGCGAAAAGTGGAG
Suggested primer 2:CCCGGTGGCTTCTGTTTTTG