Insertion junction: CLIP2.034820_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.034820
Chromosome:chromosome 8
Location:4430320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g385450 (1 of 1) PTHR22769//PTHR22769:SF42 - MUTT/NUDIX HYDROLASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCCTGGGTGGCGGGCGGCGGCAAGGTGGCGGCGCTGGACCCCGCCTCG
Internal bar code:GTTTAGGTGCTAGCGGTATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3346
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTGAATGCCTGGTGTCC
Suggested primer 2:TGATGGACTCGGACTTTGCC