Insertion junction: CLIP2.034822_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034822
Chromosome:chromosome 12
Location:5733736
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532350 CAV8 (1 of 2) PF00520//PF08016 - Ion transport protein (Ion_trans) // Polycystin cation channel (PKD_channel); Voltage-gated Ca2+ channel, alpha subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGACCCATGCCGGCGTAAACACAACTGCTGAGCTGCGCGGCCCAGCA
Internal bar code:CTGGAACCGCTATAAGCGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1399
LEAP-Seq percent confirming:12.766
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGGTGAGGTCGGTGTTG
Suggested primer 2:GTAGTGGCAGCAGTGGTCAT