Insertion junction: CLIP2.034837_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034837
Chromosome:chromosome 12
Location:3036457
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501703 (1 of 100) IPR001810 - F-box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCAGGACCGCCGCTTGCGCCAGTTCTGCCAGCGCCGCCATCGCCGCC
Internal bar code:AGAGAAGGTGCAGGGATCGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1515
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTGGTTGGTGAGTACGGC
Suggested primer 2:TTGTAGCCCGCGTATCGTAC