Insertion junction: CLIP2.034842_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.034842
Chromosome:chromosome 3
Location:4158537
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173050 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTTTTTGTCTAGGGCGCGCGCGCAAATGCCGCAAGTTAAACCCTGCGA
Internal bar code:TCGGTCTAGCCAGCTGACAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1100
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTATTCTTCCCGAGGCC
Suggested primer 2:GGCGCACATCTACATGGAGA