Insertion junction: CLIP2.034847_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.034847
Chromosome:chromosome 6
Location:5061535
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g282251 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAGAACTACAGAGGAAGAAATGCACCCGCTAACGCGGCCCTGCGCGAG
Internal bar code:CATCAGTTCTTAGGAAATTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1347
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGCTCTTCCCTGGAAAT
Suggested primer 2:CGTGTGTGCATGTGTGTACG