Insertion junction: CLIP2.034855_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034855
Chromosome:chromosome 16
Location:1161924
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650350 (1 of 1) PF03457 - Helicase associated domain (HA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGGCAGGGACAGGTGGGGAGGTTGTTCACACCACTTGCAAGCGGGG
Internal bar code:GGTATTGGTCGCCCATGGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2357
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTTACCCCCACCAATTA
Suggested primer 2:GTGCAAAAGCGCCTGTTACA