Insertion junction: CLIP2.034860_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.034860
Chromosome:chromosome 3
Location:8365480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800397 (1 of 1) K18735 - protein SMG9 (SMG9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGTCCCACCCACCCGGCCCCACGCACCCTGGGGGCAGGCCGATAGCA
Internal bar code:CATGTTCGTAGAGAAAAGGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1889
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTTCAGTGGTTGCGCTTT
Suggested primer 2:TACCAACCGGAAATCGCACA