Insertion junction: CLIP2.034860_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034860
Chromosome:chromosome 3
Location:8365485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800397 (1 of 1) K18735 - protein SMG9 (SMG9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGTGCGTGTGGGGGCGCACCTGCGTGGGAGTGCTTGTGGCCCAGGCT
Internal bar code:GTTGATTAGGGTGTCACCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2519
LEAP-Seq percent confirming:96.7033
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:TACCAACCGGAAATCGCACA
Suggested primer 2:GGTTTCAGTGGTTGCGCTTT