Insertion junction: CLIP2.034868_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034868
Chromosome:chromosome 7
Location:3308169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334650 (1 of 1) K10695 - E3 ubiquitin-protein ligase RNF1/2 [EC:6.3.2.19] (RNF1_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCACCCCGTCTCCTCTACCCCATTCCGCCCAACTCACTTCTTGGCG
Internal bar code:CGACATGCGAATATGCTATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4224
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGAACTGACTCGGGTG
Suggested primer 2:TCAGTGCGTTCTCCTTCACG