Insertion junction: CLIP2.034880_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.034880
Chromosome:chromosome 11
Location:3563055
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477950 (1 of 1) IPR000104//IPR005502 - Antifreeze protein, type I // ADP-ribosylation/Crystallin J1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCAGGCTGACACCTTTCTCCCCCTCCGCTCACCTTCGACCAAGCCTGC
Internal bar code:CGTGCTGTGACGTTGCAATGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:510
LEAP-Seq percent confirming:47.0588
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTCAAGGAGGTGCTGAC
Suggested primer 2:TCAGGAGACGGTAGCTTGGA